Whole genome sequencing and metagenomics for outbreak investigation, source attribution and risk assessment of food‐borne microorganisms

This Opinion considers the application of whole genome sequencing (WGS) and metagenomics for outbreak investigation, source attribution and risk assessment of food‐borne pathogens. WGS offers the highest level of bacterial strain discrimination for food‐borne outbreak investigation and source‐attrib...

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Detalles Bibliográficos
Publicado en:EFSA J
Main Authors: Koutsoumanis, Kostas, Allende, Ana, Alvarez‐Ordóñez, Avelino, Bolton, Declan, Bover‐Cid, Sara, Chemaly, Marianne, Davies, Robert, De Cesare, Alessandra, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Peixe, Luisa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Jenkins, Claire, Malorny, Burkhard, Ribeiro Duarte, Ana Sofia, Torpdahl, Mia, da Silva Felício, Maria Teresa, Guerra, Beatriz, Rossi, Mirko, Herman, Lieve
Formato: Artigo
Idioma:Inglês
Publicado: John Wiley and Sons Inc. 2019
Assuntos:
Scientific Opinion
Acceso en liña:https://ncbi.nlm.nih.gov/pmc/articles/PMC7008917/
https://ncbi.nlm.nih.gov/pubmed/32626197
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.2903/j.efsa.2019.5898
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