Impact of quality trimming on the efficiency of reads joining and diversity analysis of Illumina paired-end reads in the context of QIIME1 and QIIME2 microbiome analysis frameworks

BACKGROUND: To increase the accuracy of microbiome data analysis, solving the technical limitations of the existing sequencing machines is required. Quality trimming is suggested to reduce the effect of the progressive decrease in sequencing quality with the increased length of the sequenced library...

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Veröffentlicht in:BMC Bioinformatics
Hauptverfasser: Mohsen, Attayeb, Park, Jonguk, Chen, Yi-An, Kawashima, Hitoshi, Mizuguchi, Kenji
Format: Artigo
Sprache:Inglês
Veröffentlicht: BioMed Central 2019
Schlagworte:
Methodology Article
Online Zugang:https://ncbi.nlm.nih.gov/pmc/articles/PMC6858638/
https://ncbi.nlm.nih.gov/pubmed/31730472
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-019-3187-5
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