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Joining Illumina paired-end reads for classifying phylogenetic marker sequences

BACKGROUND: Illumina sequencing of a marker gene is popular in metagenomic studies. However, Illumina paired-end (PE) reads sometimes cannot be merged into single reads for subsequent analysis. When mergeable PE reads are limited, one can simply use only first reads for taxonomy annotation, but that...

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Bibliografiske detaljer
Udgivet i:BMC Bioinformatics
Main Authors: Liu, Tsunglin, Chen, Chen-Yu, Chen-Deng, An, Chen, Yi-Lin, Wang, Jiu-Yao, Hou, Yung-I, Lin, Min-Ching
Format: Artigo
Sprog:Inglês
Udgivet: BioMed Central 2020
Fag:
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC7071698/
https://ncbi.nlm.nih.gov/pubmed/32171248
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-020-3445-6
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