Joining Illumina paired-end reads for classifying phylogenetic marker sequences

BACKGROUND: Illumina sequencing of a marker gene is popular in metagenomic studies. However, Illumina paired-end (PE) reads sometimes cannot be merged into single reads for subsequent analysis. When mergeable PE reads are limited, one can simply use only first reads for taxonomy annotation, but that...

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Detalhes bibliográficos
Publicado no:BMC Bioinformatics
Main Authors: Liu, Tsunglin, Chen, Chen-Yu, Chen-Deng, An, Chen, Yi-Lin, Wang, Jiu-Yao, Hou, Yung-I, Lin, Min-Ching
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2020
Assuntos:
Methodology Article
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC7071698/
https://ncbi.nlm.nih.gov/pubmed/32171248
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-020-3445-6
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