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Enhanced Sampling in Free Energy Calculations: Combining SGLD with the Bennett’s Acceptance Ratio and Enveloping Distribution Sampling Methods

One of the key requirements for the accurate calculation of free energy differences is proper sampling of conformational space. Especially in biological applications, molecular dynamics simulations are often confronted with rugged energy surfaces and high energy barriers, leading to insufficient sam...

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Bibliographische Detailangaben
Veröffentlicht in:J Chem Theory Comput
Hauptverfasser: Konig, Gerhard, Miller, Benjamin T., Boresch, Stefan, Wu, Xiongwu, Brooks, Bernard R.
Format: Artigo
Sprache:Inglês
Veröffentlicht: 2012
Schlagworte:
Online Zugang:https://ncbi.nlm.nih.gov/pmc/articles/PMC6413517/
https://ncbi.nlm.nih.gov/pubmed/26593010
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1021/ct300116r
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