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Enhanced Sampling in Free Energy Calculations: Combining SGLD with the Bennett’s Acceptance Ratio and Enveloping Distribution Sampling Methods

One of the key requirements for the accurate calculation of free energy differences is proper sampling of conformational space. Especially in biological applications, molecular dynamics simulations are often confronted with rugged energy surfaces and high energy barriers, leading to insufficient sam...

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Detalhes bibliográficos
Publicado no:J Chem Theory Comput
Main Authors: Konig, Gerhard, Miller, Benjamin T., Boresch, Stefan, Wu, Xiongwu, Brooks, Bernard R.
Formato: Artigo
Idioma:Inglês
Publicado em: 2012
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC6413517/
https://ncbi.nlm.nih.gov/pubmed/26593010
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1021/ct300116r
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