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A benchmark study of k-mer counting methods for high-throughput sequencing

The rapid development of high-throughput sequencing technologies means that hundreds of gigabytes of sequencing data can be produced in a single study. Many bioinformatics tools require counts of substrings of length k in DNA/RNA sequencing reads obtained for applications such as genome and transcri...

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Dettagli Bibliografici
Pubblicato in:Gigascience
Autori principali: Manekar, Swati C, Sathe, Shailesh R
Natura: Artigo
Lingua:Inglês
Pubblicazione: Oxford University Press 2018
Soggetti:
Accesso online:https://ncbi.nlm.nih.gov/pmc/articles/PMC6280066/
https://ncbi.nlm.nih.gov/pubmed/30346548
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/gigascience/giy125
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