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VIPER: variability-preserving imputation for accurate gene expression recovery in single-cell RNA sequencing studies

We develop a method, VIPER, to impute the zero values in single-cell RNA sequencing studies to facilitate accurate transcriptome quantification at the single-cell level. VIPER is based on nonnegative sparse regression models and is capable of progressively inferring a sparse set of local neighborhoo...

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Detalhes bibliográficos
Publicado no:Genome Biol
Main Authors: Chen, Mengjie, Zhou, Xiang
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2018
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC6233584/
https://ncbi.nlm.nih.gov/pubmed/30419955
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13059-018-1575-1
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