HGT-ID: an efficient and sensitive workflow to detect human-viral insertion sites using next-generation sequencing data

BACKGROUND: Transfer of genetic material from microbes or viruses into the host genome is known as horizontal gene transfer (HGT). The integration of viruses into the human genome is associated with multiple cancers, and these can now be detected using next-generation sequencing methods such as whol...

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Udgivet i:BMC Bioinformatics
Main Authors: Baheti, Saurabh, Tang, Xiaojia, O’Brien, Daniel R., Chia, Nicholas, Roberts, Lewis R., Nelson, Heidi, Boughey, Judy C., Wang, Liewei, Goetz, Matthew P., Kocher, Jean-Pierre A., Kalari, Krishna R.
Format: Artigo
Sprog:Inglês
Udgivet: BioMed Central 2018
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Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC6050683/
https://ncbi.nlm.nih.gov/pubmed/30016933
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-018-2260-9
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