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VITCOMIC2: visualization tool for the phylogenetic composition of microbial communities based on 16S rRNA gene amplicons and metagenomic shotgun sequencing

BACKGROUND: The 16S rRNA gene-based amplicon sequencing analysis is widely used to determine the taxonomic composition of microbial communities. Once the taxonomic composition of each community is obtained, evolutionary relationships among taxa are inferred by a phylogenetic tree. Thus, the combined...

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Detalhes bibliográficos
Publicado no:BMC Syst Biol
Main Authors: Mori, Hiroshi, Maruyama, Takayuki, Yano, Masahiro, Yamada, Takuji, Kurokawa, Ken
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2018
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC5861490/
https://ncbi.nlm.nih.gov/pubmed/29560821
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12918-018-0545-2
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