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Fast and efficient short read mapping based on a succinct hash index
BACKGROUND: Various indexing techniques have been applied by next generation sequencing read mapping tools. The choice of a particular data structure is a trade-off between memory consumption, mapping throughput, and construction time. RESULTS: We present the succinct hash index – a novel data struc...
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| Publicado no: | BMC Bioinformatics |
|---|---|
| Main Authors: | , , , , |
| Formato: | Artigo |
| Idioma: | Inglês |
| Publicado em: |
BioMed Central
2018
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| Assuntos: | |
| Acesso em linha: | https://ncbi.nlm.nih.gov/pmc/articles/PMC5845352/ https://ncbi.nlm.nih.gov/pubmed/29523083 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-018-2094-5 |
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