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Phylogenetic factorization of compositional data yields lineage-level associations in microbiome datasets

Marker gene sequencing of microbial communities has generated big datasets of microbial relative abundances varying across environmental conditions, sample sites and treatments. These data often come with putative phylogenies, providing unique opportunities to investigate how shared evolutionary his...

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Detalhes bibliográficos
Publicado no:PeerJ
Main Authors: Washburne, Alex D., Silverman, Justin D., Leff, Jonathan W., Bennett, Dominic J., Darcy, John L., Mukherjee, Sayan, Fierer, Noah, David, Lawrence A.
Formato: Artigo
Idioma:Inglês
Publicado em: PeerJ Inc. 2017
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC5345826/
https://ncbi.nlm.nih.gov/pubmed/28289558
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.7717/peerj.2969
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