NASP: an accurate, rapid method for the identification of SNPs in WGS datasets that supports flexible input and output formats

Whole-genome sequencing (WGS) of bacterial isolates has become standard practice in many laboratories. Applications for WGS analysis include phylogeography and molecular epidemiology, using single nucleotide polymorphisms (SNPs) as the unit of evolution. NASP was developed as a reproducible method t...

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Bibliografski detalji
Izdano u:Microb Genom
Glavni autori: Sahl, Jason W., Lemmer, Darrin, Travis, Jason, Schupp, James M., Gillece, John D., Aziz, Maliha, Driebe, Elizabeth M., Drees, Kevin P., Hicks, Nathan D., Williamson, Charles Hall Davis, Hepp, Crystal M., Smith, David Earl, Roe, Chandler, Engelthaler, David M., Wagner, David M., Keim, Paul
Format: Artigo
Jezik:Inglês
Izdano: Microbiology Society 2016
Teme:
Methods Paper
Online pristup:https://ncbi.nlm.nih.gov/pmc/articles/PMC5320593/
https://ncbi.nlm.nih.gov/pubmed/28348869
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1099/mgen.0.000074
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