Rice SNP-seek database update: new SNPs, indels, and queries

We describe updates to the Rice SNP-Seek Database since its first release. We ran a new SNP-calling pipeline followed by filtering that resulted in complete, base, filtered and core SNP datasets. Besides the Nipponbare reference genome, the pipeline was run on genome assemblies of IR 64, 93-11, DJ 1...

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Опубликовано в: :Nucleic Acids Res
Главные авторы: Mansueto, Locedie, Fuentes, Roven Rommel, Borja, Frances Nikki, Detras, Jeffery, Abriol-Santos, Juan Miguel, Chebotarov, Dmytro, Sanciangco, Millicent, Palis, Kevin, Copetti, Dario, Poliakov, Alexandre, Dubchak, Inna, Solovyev, Victor, Wing, Rod A., Hamilton, Ruaraidh Sackville, Mauleon, Ramil, McNally, Kenneth L., Alexandrov, Nickolai
Формат: Artigo
Язык:Inglês
Опубликовано: Oxford University Press 2017
Предметы:
Database Issue
Online-ссылка:https://ncbi.nlm.nih.gov/pmc/articles/PMC5210592/
https://ncbi.nlm.nih.gov/pubmed/27899667
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/nar/gkw1135
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