Rice SNP-seek database update: new SNPs, indels, and queries

We describe updates to the Rice SNP-Seek Database since its first release. We ran a new SNP-calling pipeline followed by filtering that resulted in complete, base, filtered and core SNP datasets. Besides the Nipponbare reference genome, the pipeline was run on genome assemblies of IR 64, 93-11, DJ 1...

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Dettagli Bibliografici
Pubblicato in:Nucleic Acids Res
Autori principali: Mansueto, Locedie, Fuentes, Roven Rommel, Borja, Frances Nikki, Detras, Jeffery, Abriol-Santos, Juan Miguel, Chebotarov, Dmytro, Sanciangco, Millicent, Palis, Kevin, Copetti, Dario, Poliakov, Alexandre, Dubchak, Inna, Solovyev, Victor, Wing, Rod A., Hamilton, Ruaraidh Sackville, Mauleon, Ramil, McNally, Kenneth L., Alexandrov, Nickolai
Natura: Artigo
Lingua:Inglês
Pubblicazione: Oxford University Press 2017
Soggetti:
Database Issue
Accesso online:https://ncbi.nlm.nih.gov/pmc/articles/PMC5210592/
https://ncbi.nlm.nih.gov/pubmed/27899667
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/nar/gkw1135
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