Rice SNP-seek database update: new SNPs, indels, and queries

We describe updates to the Rice SNP-Seek Database since its first release. We ran a new SNP-calling pipeline followed by filtering that resulted in complete, base, filtered and core SNP datasets. Besides the Nipponbare reference genome, the pipeline was run on genome assemblies of IR 64, 93-11, DJ 1...

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Detalhes bibliográficos
Publicado no:Nucleic Acids Res
Main Authors: Mansueto, Locedie, Fuentes, Roven Rommel, Borja, Frances Nikki, Detras, Jeffery, Abriol-Santos, Juan Miguel, Chebotarov, Dmytro, Sanciangco, Millicent, Palis, Kevin, Copetti, Dario, Poliakov, Alexandre, Dubchak, Inna, Solovyev, Victor, Wing, Rod A., Hamilton, Ruaraidh Sackville, Mauleon, Ramil, McNally, Kenneth L., Alexandrov, Nickolai
Formato: Artigo
Idioma:Inglês
Publicado em: Oxford University Press 2017
Assuntos:
Database Issue
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC5210592/
https://ncbi.nlm.nih.gov/pubmed/27899667
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/nar/gkw1135
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