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rapidGSEA: Speeding up gene set enrichment analysis on multi-core CPUs and CUDA-enabled GPUs

BACKGROUND: Gene Set Enrichment Analysis (GSEA) is a popular method to reveal significant dependencies between predefined sets of gene symbols and observed phenotypes by evaluating the deviation of gene expression values between cases and controls. An established measure of inter-class deviation, th...

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Detalhes bibliográficos
Publicado no:BMC Bioinformatics
Main Authors: Hundt, Christian, Hildebrandt, Andreas, Schmidt, Bertil
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2016
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC5035472/
https://ncbi.nlm.nih.gov/pubmed/27663265
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-016-1244-x
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