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rapidGSEA: Speeding up gene set enrichment analysis on multi-core CPUs and CUDA-enabled GPUs

BACKGROUND: Gene Set Enrichment Analysis (GSEA) is a popular method to reveal significant dependencies between predefined sets of gene symbols and observed phenotypes by evaluating the deviation of gene expression values between cases and controls. An established measure of inter-class deviation, th...

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Pubblicato in:BMC Bioinformatics
Autori principali: Hundt, Christian, Hildebrandt, Andreas, Schmidt, Bertil
Natura: Artigo
Lingua:Inglês
Pubblicazione: BioMed Central 2016
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Accesso online:https://ncbi.nlm.nih.gov/pmc/articles/PMC5035472/
https://ncbi.nlm.nih.gov/pubmed/27663265
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-016-1244-x
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