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seqlm: an MDL based method for identifying differentially methylated regions in high density methylation array data

Motivation: One of the main goals of large scale methylation studies is to detect differentially methylated loci. One way is to approach this problem sitewise, i.e. to find differentially methylated positions (DMPs). However, it has been shown that methylation is regulated in longer genomic regions....

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Vydáno v:Bioinformatics
Hlavní autoři: Kolde, Raivo, Märtens, Kaspar, Lokk, Kaie, Laur, Sven, Vilo, Jaak
Médium: Artigo
Jazyk:Inglês
Vydáno: Oxford University Press 2016
Témata:
On-line přístup:https://ncbi.nlm.nih.gov/pmc/articles/PMC5013909/
https://ncbi.nlm.nih.gov/pubmed/27187204
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btw304
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