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Taxonomer: an interactive metagenomics analysis portal for universal pathogen detection and host mRNA expression profiling

BACKGROUND: High-throughput sequencing enables unbiased profiling of microbial communities, universal pathogen detection, and host response to infectious diseases. However, computation times and algorithmic inaccuracies have hindered adoption. RESULTS: We present Taxonomer, an ultrafast, web-tool fo...

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Detalhes bibliográficos
Publicado no:Genome Biol
Main Authors: Flygare, Steven, Simmon, Keith, Miller, Chase, Qiao, Yi, Kennedy, Brett, Di Sera, Tonya, Graf, Erin H., Tardif, Keith D., Kapusta, Aurélie, Rynearson, Shawn, Stockmann, Chris, Queen, Krista, Tong, Suxiang, Voelkerding, Karl V., Blaschke, Anne, Byington, Carrie L., Jain, Seema, Pavia, Andrew, Ampofo, Krow, Eilbeck, Karen, Marth, Gabor, Yandell, Mark, Schlaberg, Robert
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2016
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC4880956/
https://ncbi.nlm.nih.gov/pubmed/27224977
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13059-016-0969-1
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