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OEFinder: a user interface to identify and visualize ordering effects in single-cell RNA-seq data

Summary: A recent article identified an artifact in multiple single-cell RNA-seq (scRNA-seq) datasets generated by the Fluidigm C1 platform. Specifically, Leng et al. showed significantly increased gene expression in cells captured from sites with small or large plate output IDs. We refer to this ar...

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發表在:Bioinformatics
Main Authors: Leng, Ning, Choi, Jeea, Chu, Li-Fang, Thomson, James A., Kendziorski, Christina, Stewart, Ron
格式: Artigo
語言:Inglês
出版: Oxford University Press 2016
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在線閱讀:https://ncbi.nlm.nih.gov/pmc/articles/PMC4848403/
https://ncbi.nlm.nih.gov/pubmed/26743507
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btw004
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