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OEFinder: a user interface to identify and visualize ordering effects in single-cell RNA-seq data

Summary: A recent article identified an artifact in multiple single-cell RNA-seq (scRNA-seq) datasets generated by the Fluidigm C1 platform. Specifically, Leng et al. showed significantly increased gene expression in cells captured from sites with small or large plate output IDs. We refer to this ar...

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Detalhes bibliográficos
Publicado no:Bioinformatics
Main Authors: Leng, Ning, Choi, Jeea, Chu, Li-Fang, Thomson, James A., Kendziorski, Christina, Stewart, Ron
Formato: Artigo
Idioma:Inglês
Publicado em: Oxford University Press 2016
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC4848403/
https://ncbi.nlm.nih.gov/pubmed/26743507
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btw004
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