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Fast and sensitive mapping of nanopore sequencing reads with GraphMap

Realizing the democratic promise of nanopore sequencing requires the development of new bioinformatics approaches to deal with its specific error characteristics. Here we present GraphMap, a mapping algorithm designed to analyse nanopore sequencing reads, which progressively refines candidate alignm...

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Bibliografiske detaljer
Udgivet i:Nat Commun
Main Authors: Sović, Ivan, Šikić, Mile, Wilm, Andreas, Fenlon, Shannon Nicole, Chen, Swaine, Nagarajan, Niranjan
Format: Artigo
Sprog:Inglês
Udgivet: Nature Publishing Group 2016
Fag:
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC4835549/
https://ncbi.nlm.nih.gov/pubmed/27079541
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1038/ncomms11307
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