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Fast Search of Thousands of Short-Read Sequencing Experiments

We introduce Sequence Bloom Trees, a method for querying thousands of short-read sequencing experiments by sequence 485 times faster than existing approaches. The approach searches large data archives for all experiments that involve a given sequence. We use Sequence Bloom Trees to search 2652 human...

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書目詳細資料
發表在:Nat Biotechnol
Main Authors: Solomon, Brad, Kingsford, Carl
格式: Artigo
語言:Inglês
出版: 2016
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在線閱讀:https://ncbi.nlm.nih.gov/pmc/articles/PMC4804353/
https://ncbi.nlm.nih.gov/pubmed/26854477
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1038/nbt.3442
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