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Optimal design of gene knockout experiments for gene regulatory network inference

Motivation: We addressed the problem of inferring gene regulatory network (GRN) from gene expression data of knockout (KO) experiments. This inference is known to be underdetermined and the GRN is not identifiable from data. Past studies have shown that suboptimal design of experiments (DOE) contrib...

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Shranjeno v:
Bibliografske podrobnosti
izdano v:Bioinformatics
Main Authors: Ud-Dean, S. M. Minhaz, Gunawan, Rudiyanto
Format: Artigo
Jezik:Inglês
Izdano: Oxford University Press 2016
Teme:
Online dostop:https://ncbi.nlm.nih.gov/pmc/articles/PMC4803391/
https://ncbi.nlm.nih.gov/pubmed/26568633
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btv672
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