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Optimal design of gene knockout experiments for gene regulatory network inference

Motivation: We addressed the problem of inferring gene regulatory network (GRN) from gene expression data of knockout (KO) experiments. This inference is known to be underdetermined and the GRN is not identifiable from data. Past studies have shown that suboptimal design of experiments (DOE) contrib...

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Dettagli Bibliografici
Pubblicato in:Bioinformatics
Autori principali: Ud-Dean, S. M. Minhaz, Gunawan, Rudiyanto
Natura: Artigo
Lingua:Inglês
Pubblicazione: Oxford University Press 2016
Soggetti:
Accesso online:https://ncbi.nlm.nih.gov/pmc/articles/PMC4803391/
https://ncbi.nlm.nih.gov/pubmed/26568633
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btv672
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