High-Specificity Targeted Functional Profiling in Microbial Communities with ShortBRED

Profiling microbial community function from metagenomic sequencing data remains a computationally challenging problem. Mapping millions of DNA reads from such samples to reference protein databases requires long run-times, and short read lengths can result in spurious hits to unrelated proteins (los...

Deskribapen osoa

Gorde:
Xehetasun bibliografikoak
Argitaratua izan da:PLoS Comput Biol
Egile Nagusiak: Kaminski, James, Gibson, Molly K., Franzosa, Eric A., Segata, Nicola, Dantas, Gautam, Huttenhower, Curtis
Formatua: Artigo
Hizkuntza:Inglês
Argitaratua: Public Library of Science 2015
Gaiak:
Research Article
Sarrera elektronikoa:https://ncbi.nlm.nih.gov/pmc/articles/PMC4684307/
https://ncbi.nlm.nih.gov/pubmed/26682918
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pcbi.1004557
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