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Improved OTU-picking using long-read 16S rRNA gene amplicon sequencing and generic hierarchical clustering

BACKGROUND: High-throughput bacterial 16S rRNA gene sequencing followed by clustering of short sequences into operational taxonomic units (OTUs) is widely used for microbiome profiling. However, clustering of short 16S rRNA gene reads into biologically meaningful OTUs is challenging, in part because...

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書目詳細資料
發表在:Microbiome
Main Authors: Franzén, Oscar, Hu, Jianzhong, Bao, Xiuliang, Itzkowitz, Steven H., Peter, Inga, Bashir, Ali
格式: Artigo
語言:Inglês
出版: BioMed Central 2015
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在線閱讀:https://ncbi.nlm.nih.gov/pmc/articles/PMC4593230/
https://ncbi.nlm.nih.gov/pubmed/26434730
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s40168-015-0105-6
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