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The impact of read length on quantification of differentially expressed genes and splice junction detection

BACKGROUND: The initial next-generation sequencing technologies produced reads of 25 or 36 bp, and only from a single-end of the library sequence. Currently, it is possible to reliably produce 300 bp paired-end sequences for RNA expression analysis. While read lengths have consistently increased, pe...

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Detalhes bibliográficos
Publicado no:Genome Biol
Main Authors: Chhangawala, Sagar, Rudy, Gabe, Mason, Christopher E., Rosenfeld, Jeffrey A.
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2015
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC4531809/
https://ncbi.nlm.nih.gov/pubmed/26100517
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13059-015-0697-y
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