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SeqGL Identifies Context-Dependent Binding Signals in Genome-Wide Regulatory Element Maps

Genome-wide maps of transcription factor (TF) occupancy and regions of open chromatin implicitly contain DNA sequence signals for multiple factors. We present SeqGL, a novel de novo motif discovery algorithm to identify multiple TF sequence signals from ChIP-, DNase-, and ATAC-seq profiles. SeqGL tr...

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Wedi'i Gadw mewn:
Manylion Llyfryddiaeth
Cyhoeddwyd yn:PLoS Comput Biol
Prif Awduron: Setty, Manu, Leslie, Christina S.
Fformat: Artigo
Iaith:Inglês
Cyhoeddwyd: Public Library of Science 2015
Pynciau:
Mynediad Ar-lein:https://ncbi.nlm.nih.gov/pmc/articles/PMC4446265/
https://ncbi.nlm.nih.gov/pubmed/26016777
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pcbi.1004271
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