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HeLa Nucleic Acid Contamination in The Cancer Genome Atlas Leads to the Misidentification of Human Papillomavirus 18

We searched The Cancer Genome Atlas (TCGA) database for viruses by comparing non-human reads present in transcriptome sequencing (RNA-Seq) and whole-exome sequencing (WXS) data to viral sequence databases. Human papillomavirus 18 (HPV18) is an etiologic agent of cervical cancer, and as expected, we...

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Detalhes bibliográficos
Publicado no:J Virol
Main Authors: Cantalupo, Paul G., Katz, Joshua P., Pipas, James M.
Formato: Artigo
Idioma:Inglês
Publicado em: American Society for Microbiology 2015
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC4442357/
https://ncbi.nlm.nih.gov/pubmed/25631090
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1128/JVI.03365-14
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