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Normalization of RNA-seq data using factor analysis of control genes or samples

Normalization of RNA-seq data has proven essential to ensure accurate inference of expression levels. Here we show that usual normalization approaches mostly account for sequencing depth and fail to correct for library preparation and other more-complex unwanted effects. We evaluate the performance...

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Detalles Bibliográficos
Publicado en:Nat Biotechnol
Autores principales: Risso, Davide, Ngai, John, Speed, Terence P., Dudoit, Sandrine
Formato: Artigo
Lenguaje:Inglês
Publicado: 2014
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Acceso en línea:https://ncbi.nlm.nih.gov/pmc/articles/PMC4404308/
https://ncbi.nlm.nih.gov/pubmed/25150836
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1038/nbt.2931
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