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Normalization of RNA-seq data using factor analysis of control genes or samples

Normalization of RNA-seq data has proven essential to ensure accurate inference of expression levels. Here we show that usual normalization approaches mostly account for sequencing depth and fail to correct for library preparation and other more-complex unwanted effects. We evaluate the performance...

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Detalles Bibliográficos
Publicado en:Nat Biotechnol
Main Authors: Risso, Davide, Ngai, John, Speed, Terence P., Dudoit, Sandrine
Formato: Artigo
Idioma:Inglês
Publicado: 2014
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Acceso en liña:https://ncbi.nlm.nih.gov/pmc/articles/PMC4404308/
https://ncbi.nlm.nih.gov/pubmed/25150836
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1038/nbt.2931
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