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Arioc: high-throughput read alignment with GPU-accelerated exploration of the seed-and-extend search space
When computing alignments of DNA sequences to a large genome, a key element in achieving high processing throughput is to prioritize locations in the genome where high-scoring mappings might be expected. We formulated this task as a series of list-processing operations that can be efficiently perfor...
Uloženo v:
| Vydáno v: | PeerJ |
|---|---|
| Hlavní autoři: | , , , , , |
| Médium: | Artigo |
| Jazyk: | Inglês |
| Vydáno: |
PeerJ Inc.
2015
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| Témata: | |
| On-line přístup: | https://ncbi.nlm.nih.gov/pmc/articles/PMC4358639/ https://ncbi.nlm.nih.gov/pubmed/25780763 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.7717/peerj.808 |
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