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Effective alignment of RNA pseudoknot structures using partition function posterior log-odds scores

BACKGROUND: RNA pseudoknots play important roles in many biological processes. Previous methods for comparative pseudoknot analysis mainly focus on simultaneous folding and alignment of RNA sequences. Little work has been done to align two known RNA secondary structures with pseudoknots taking into...

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Detalhes bibliográficos
Publicado no:BMC Bioinformatics
Main Authors: Song, Yang, Hua, Lei, Shapiro, Bruce A, Wang, Jason TL
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2015
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC4339682/
https://ncbi.nlm.nih.gov/pubmed/25727492
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-015-0464-9
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