ExpaRNA-P: simultaneous exact pattern matching and folding of RNAs

BACKGROUND: Identifying sequence-structure motifs common to two RNAs can speed up the comparison of structural RNAs substantially. The core algorithm of the existent approach ExpaRNA solves this problem for a priori known input structures. However, such structures are rarely known; moreover, predict...

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Bibliographic Details
Published in:BMC Bioinformatics
Main Authors: Otto, Christina, Möhl, Mathias, Heyne, Steffen, Amit, Mika, Landau, Gad M, Backofen, Rolf, Will, Sebastian
Format: Artigo
Language:Inglês
Published: BioMed Central 2014
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Research Article
Online Access:https://ncbi.nlm.nih.gov/pmc/articles/PMC4302096/
https://ncbi.nlm.nih.gov/pubmed/25551362
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-014-0404-0
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