μABC: a systematic microsecond molecular dynamics study of tetranucleotide sequence effects in B-DNA

We present the results of microsecond molecular dynamics simulations carried out by the ABC group of laboratories on a set of B-DNA oligomers containing the 136 distinct tetranucleotide base sequences. We demonstrate that the resulting trajectories have extensively sampled the conformational space a...

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Detalhes bibliográficos
Publicado no:Nucleic Acids Res
Main Authors: Pasi, Marco, Maddocks, John H., Beveridge, David, Bishop, Thomas C., Case, David A., Cheatham, Thomas, Dans, Pablo D., Jayaram, B., Lankas, Filip, Laughton, Charles, Mitchell, Jonathan, Osman, Roman, Orozco, Modesto, Pérez, Alberto, Petkevičiūtė, Daiva, Spackova, Nada, Sponer, Jiri, Zakrzewska, Krystyna, Lavery, Richard
Formato: Artigo
Idioma:Inglês
Publicado em: Oxford University Press 2014
Assuntos:
Structural Biology
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC4231739/
https://ncbi.nlm.nih.gov/pubmed/25260586
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/nar/gku855
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