FOAM (Functional Ontology Assignments for Metagenomes): a Hidden Markov Model (HMM) database with environmental focus

A new functional gene database, FOAM (Functional Ontology Assignments for Metagenomes), was developed to screen environmental metagenomic sequence datasets. FOAM provides a new functional ontology dedicated to classify gene functions relevant to environmental microorganisms based on Hidden Markov Mo...

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Dettagli Bibliografici
Pubblicato in:Nucleic Acids Res
Autori principali: Prestat, Emmanuel, David, Maude M., Hultman, Jenni, Taş, Neslihan, Lamendella, Regina, Dvornik, Jill, Mackelprang, Rachel, Myrold, David D., Jumpponen, Ari, Tringe, Susannah G., Holman, Elizabeth, Mavromatis, Konstantinos, Jansson, Janet K.
Natura: Artigo
Lingua:Inglês
Pubblicazione: Oxford University Press 2014
Soggetti:
Methods Online
Accesso online:https://ncbi.nlm.nih.gov/pmc/articles/PMC4231724/
https://ncbi.nlm.nih.gov/pubmed/25260589
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/nar/gku702
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