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pHMM-tree: phylogeny of profile hidden Markov models

Protein families are often represented by profile hidden Markov models (pHMMs). Homology between two distant protein families can be determined by comparing the pHMMs. Here we explored the idea of building a phylogeny of protein families using the distance matrix of their pHMMs. We developed a new s...

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Podrobná bibliografie
Vydáno v:Bioinformatics
Hlavní autoři: Huo, Luyang, Zhang, Han, Huo, Xueting, Yang, Yasong, Li, Xueqiong, Yin, Yanbin
Médium: Artigo
Jazyk:Inglês
Vydáno: Oxford University Press 2017
Témata:
On-line přístup:https://ncbi.nlm.nih.gov/pmc/articles/PMC5860389/
https://ncbi.nlm.nih.gov/pubmed/28062446
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btw779
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