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A model-based information sharing protocol for profile Hidden Markov Models used for HIV-1 recombination detection

BACKGROUND: In many applications, a family of nucleotide or protein sequences classified into several subfamilies has to be modeled. Profile Hidden Markov Models (pHMMs) are widely used for this task, modeling each subfamily separately by one pHMM. However, a major drawback of this approach is the d...

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Detalhes bibliográficos
Publicado no:BMC Bioinformatics
Main Authors: Bulla, Ingo, Schultz, Anne-Kathrin, Chesneau, Christophe, Mark, Tanya, Serea, Florin
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2014
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC4230192/
https://ncbi.nlm.nih.gov/pubmed/24946781
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2105-15-205
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