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A model-based information sharing protocol for profile Hidden Markov Models used for HIV-1 recombination detection

BACKGROUND: In many applications, a family of nucleotide or protein sequences classified into several subfamilies has to be modeled. Profile Hidden Markov Models (pHMMs) are widely used for this task, modeling each subfamily separately by one pHMM. However, a major drawback of this approach is the d...

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Publicat a:BMC Bioinformatics
Autors principals: Bulla, Ingo, Schultz, Anne-Kathrin, Chesneau, Christophe, Mark, Tanya, Serea, Florin
Format: Artigo
Idioma:Inglês
Publicat: BioMed Central 2014
Matèries:
Accés en línia:https://ncbi.nlm.nih.gov/pmc/articles/PMC4230192/
https://ncbi.nlm.nih.gov/pubmed/24946781
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2105-15-205
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