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Searching for Repeats, as an Example of Using the Generalized Ruzzo-Tompa Algorithm to Find Optimal Subsequences with Gaps
BACKGROUND: Some biological sequences contain subsequences of unusual composition, e.g., some proteins contain DNA binding domains, transmembrane regions, and charged regions; and some DNA sequences contain repeats. Requiring time linear in the length of an input sequence, the Ruzzo-Tompa (RT) Algor...
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| Main Authors: | , , |
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| Formato: | Artigo |
| Idioma: | Inglês |
| Publicado em: |
2014
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| Assuntos: | |
| Acesso em linha: | https://ncbi.nlm.nih.gov/pmc/articles/PMC4135518/ https://ncbi.nlm.nih.gov/pubmed/24989859 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1504/IJBRA.2014.062991 |
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