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A Combined Metadynamics and Umbrella Sampling Method for the Calculation of Ion Permeation Free Energy Profiles

Free energy calculations are one of the most useful methods for the study of ion transport mechanisms through confined spaces such as protein ion channels. Their reliability depends on a correctly defined reaction coordinate (RC). A straight line is usually not a proper RC for such complicated proce...

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Bibliografiske detaljer
Main Authors: Zhang, Yong, Voth, Gregory A.
Format: Artigo
Sprog:Inglês
Udgivet: 2011
Fag:
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC4120845/
https://ncbi.nlm.nih.gov/pubmed/25100923
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1021/ct200100e
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