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Incorporating chemical modification constraints into a dynamic programming algorithm for prediction of RNA secondary structure

A dynamic programming algorithm for prediction of RNA secondary structure has been revised to accommodate folding constraints determined by chemical modification and to include free energy increments for coaxial stacking of helices when they are either adjacent or separated by a single mismatch. Fur...

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Detalhes bibliográficos
Main Authors: Mathews, David H., Disney, Matthew D., Childs, Jessica L., Schroeder, Susan J., Zuker, Michael, Turner, Douglas H.
Formato: Artigo
Idioma:Inglês
Publicado em: National Academy of Sciences 2004
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Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC409911/
https://ncbi.nlm.nih.gov/pubmed/15123812
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1073/pnas.0401799101
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