RNAmotifs: prediction of multivalent RNA motifs that control alternative splicing

RNA-binding proteins (RBPs) regulate splicing according to position-dependent principles, which can be exploited for analysis of regulatory motifs. Here we present RNAmotifs, a method that evaluates the sequence around differentially regulated alternative exons to identify clusters of short and dege...

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Autori principali: Cereda, Matteo, Pozzoli, Uberto, Rot, Gregor, Juvan, Peter, Schweitzer, Anthony, Clark, Tyson, Ule, Jernej
Natura: Artigo
Lingua:Inglês
Pubblicazione: BioMed Central 2014
Soggetti:
Method
Accesso online:https://ncbi.nlm.nih.gov/pmc/articles/PMC4054596/
https://ncbi.nlm.nih.gov/pubmed/24485098
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/gb-2014-15-1-r20
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