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Pathset Graphs: A Novel Approach for Comprehensive Utilization of Paired Reads in Genome Assembly

One of the key advances in genome assembly that has led to a significant improvement in contig lengths has been improved algorithms for utilization of paired reads (mate-pairs). While in most assemblers, mate-pair information is used in a post-processing step, the recently proposed Paired de Bruijn...

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Hlavní autoři: Pham, Son K., Antipov, Dmitry, Sirotkin, Alexander, Tesler, Glenn, Pevzner, Pavel A., Alekseyev, Max A.
Médium: Artigo
Jazyk:Inglês
Vydáno: Mary Ann Liebert, Inc. 2013
Témata:
On-line přístup:https://ncbi.nlm.nih.gov/pmc/articles/PMC3619201/
https://ncbi.nlm.nih.gov/pubmed/22803627
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1089/cmb.2012.0098
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