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On the use of orientational restraints and symmetry corrections in alchemical free energy calculations

Alchemical free energy calculations are becoming a useful tool for calculating absolute binding free energies of small molecule ligands to proteins. Here, we find that the presence of multiple metastable ligand orientations can cause convergence problems when distance restraints alone are used. We d...

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Autors principals: Mobley, David L., Chodera, John D., Dill, Ken A.
Format: Artigo
Idioma:Inglês
Publicat: 2006
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Accés en línia:https://ncbi.nlm.nih.gov/pmc/articles/PMC3583553/
https://ncbi.nlm.nih.gov/pubmed/16965052
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1063/1.2221683
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