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Separated topologies—A method for relative binding free energy calculations using orientational restraints

Orientational restraints can improve the efficiency of alchemical free energy calculations, but they are not typically applied in relative binding calculations, which compute the affinity difference been two ligands. Here, we describe a new “separated topologies” method, which computes relative bind...

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Detalhes bibliográficos
Main Authors: Rocklin, Gabriel J., Mobley, David L., Dill, Ken A.
Formato: Artigo
Idioma:Inglês
Publicado em: American Institute of Physics 2013
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC3598757/
https://ncbi.nlm.nih.gov/pubmed/23464180
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1063/1.4792251
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