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Separated topologies—A method for relative binding free energy calculations using orientational restraints

Orientational restraints can improve the efficiency of alchemical free energy calculations, but they are not typically applied in relative binding calculations, which compute the affinity difference been two ligands. Here, we describe a new “separated topologies” method, which computes relative bind...

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Détails bibliographiques
Auteurs principaux: Rocklin, Gabriel J., Mobley, David L., Dill, Ken A.
Format: Artigo
Langue:Inglês
Publié: American Institute of Physics 2013
Sujets:
Accès en ligne:https://ncbi.nlm.nih.gov/pmc/articles/PMC3598757/
https://ncbi.nlm.nih.gov/pubmed/23464180
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1063/1.4792251
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