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Separated topologies—A method for relative binding free energy calculations using orientational restraints

Orientational restraints can improve the efficiency of alchemical free energy calculations, but they are not typically applied in relative binding calculations, which compute the affinity difference been two ligands. Here, we describe a new “separated topologies” method, which computes relative bind...

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Bibliografske podrobnosti
Main Authors: Rocklin, Gabriel J., Mobley, David L., Dill, Ken A.
Format: Artigo
Jezik:Inglês
Izdano: American Institute of Physics 2013
Teme:
Online dostop:https://ncbi.nlm.nih.gov/pmc/articles/PMC3598757/
https://ncbi.nlm.nih.gov/pubmed/23464180
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1063/1.4792251
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