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A Simplified Confinement Method (SCM) for Calculating Absolute Free Energies and Free Energy and Entropy Differences

A simple and robust formulation of the path-independent confinement method for the calculation of free energies is presented. The simplified confinement method (SCM) does not require matrix diagonalization or switching off the molecular force field, and has a simple convergence criterion. The method...

Ausführliche Beschreibung

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Bibliographische Detailangaben
Hauptverfasser: Ovchinnikov, Victor, Cecchini, Marco, Karplus, Martin
Format: Artigo
Sprache:Inglês
Veröffentlicht: 2013
Schlagworte:
Online Zugang:https://ncbi.nlm.nih.gov/pmc/articles/PMC3569517/
https://ncbi.nlm.nih.gov/pubmed/23268557
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1021/jp3080578
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