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Thermodynamics and kinetics of the hairpin ribozyme from atomistic folding/unfolding simulations

We report a set of atomistic folding/unfolding simulations for the hairpin ribozyme using a monte carlo algorithm. The hairpin ribozyme folds in solution and catalyzes self-cleavage or ligation via a specific two-domain structure. The minimal active ribozyme has been studied extensively, showing sta...

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Autori principali: Nivón, Lucas G., Shakhnovich, Eugene I.
Natura: Artigo
Lingua:Inglês
Pubblicazione: 2011
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Accesso online:https://ncbi.nlm.nih.gov/pmc/articles/PMC3508787/
https://ncbi.nlm.nih.gov/pubmed/21740912
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1016/j.jmb.2011.06.042
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