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The Triform algorithm: improved sensitivity and specificity in ChIP-Seq peak finding

BACKGROUND: Chromatin immunoprecipitation combined with high-throughput sequencing (ChIP-Seq) is the most frequently used method to identify the binding sites of transcription factors. Active binding sites can be seen as peaks in enrichment profiles when the sequencing reads are mapped to a referenc...

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Autori principali: Kornacker, Karl, Rye, Morten Beck, Håndstad, Tony, Drabløs, Finn
Natura: Artigo
Lingua:Inglês
Pubblicazione: BioMed Central 2012
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Accesso online:https://ncbi.nlm.nih.gov/pmc/articles/PMC3480842/
https://ncbi.nlm.nih.gov/pubmed/22827163
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2105-13-176
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